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Št. zadetkov: 38
Kako razumemo kaj se dogaja v rastlinski celici pod stresom – večnivojska integracija podatkov
Maja Zagorščak
Prispevek na konferenci brez natisa
Oznake: odziv krompirja na stres;statistične metode;metode strojnega učenja;Super krompir;projekt ADAPT;Nacionalni inštitut za biologijo;
Kako razumemo kaj se dogaja v rastlinski celici pod stresom – večnivojska integracija podatkov
Leto: 2025 Vir: Nacionalni inštitut za biologijo (NIB)
NIB-SI/SPOZNAJ: Priprava, urejanje in obdelava podatkov s prog. orodji
Maja Zagorščak
Programska oprema
Oznake: SPOZNAJ;R;Py;
https://projekt-spoznaj.si/ https://projekt-spoznaj.si/2-usposabljanje-za-podatkovne-strokovnjake-jesen-zima-2025-26/
Leto: 2026 Vir: Nacionalni inštitut za biologijo (NIB)
ǂA ǂcomprehensive guide to potato transcriptome assembly
Maja Zagorščak, Marko Petek
Samostojni znanstveni sestavek ali poglavje v monografski publikaciji
Oznake: de novo sestavljanje transkriptomov;visoko zmogljive tehnologije sekveniranja;pan-transkriptom;FASTQ;rastlinski transkriptom;tetraploidni krompir;RNA-sekvenciranje;
We have witnessed a rapid advancement in high-throughput genome sequencing and the maturation of long-read technologies. However, an accurate assembly of polyploid potato genomes still remains challenging. Sequencing the double-monoploid genome of Solanum tuberosum Group Phureja (Xu et al., Nature 4 ...
Leto: 2021 Vir: Repozitorij Univerze v Ljubljani (RUL)
Complete dry-lab workflow for an ERF transcription factor StPti5, a novel regulator of endophyte community maintenance in potato
Marko Petek, Maja Zagorščak
Programska oprema
Oznake: gsea;qpcr analysis;rna seq analysis;statistical analysis;
Complete dry-lab workflow for An ERF transcription factor StPti5, a novel regulator of endophyte community maintenance in potato
Leto: 2026 Vir: Nacionalni inštitut za biologijo (NIB)
Dependence of lesion development on circadian rhythm in potato
Juliane Pfeil, Maja Zagorščak
Programska oprema
Oznake: image analysis;image processing;
Lesion development in genotypes Rywal and RywalNahG. Do lesions grow with different speed during the day? Do lesions grow with different speed in in genotype Rywal than in genotype RywalNahG? 18 experiments were taken by visible light microscope and 5 experiments by infra red microscope. The ...
Leto: 2021 Vir: Nacionalni inštitut za biologijo (NIB)
Promotor sequence extraction in R
Maja Zagorščak, Valentina Levak
Programska oprema
Oznake: promotor;R;
Promotor sequence extraction in R
Leto: 2026 Vir: Nacionalni inštitut za biologijo (NIB)
Methodologies for discovery and quantitative profiling of sRNAs in potato
Maja Križnik, Maja Zagorščak, Kristina Gruden
Samostojni znanstveni sestavek ali poglavje v monografski publikaciji
Oznake: rastline;krompir;identifikacija;sekveniranje;izražanje;napoved tarč;analiza malih RNA;
Small RNAs (sRNAs) are short noncoding RNAs involved in the regulation of a wide range of biological processes in plants. Advances in high-throughput sequencing and development of new computational tools had facilitated the discovery of different classes of sRNAs, their quantification, and elucidati ...
Leto: 2021 Vir: Repozitorij Univerze v Ljubljani (RUL)
Multiscale modelling and systems analysis of potato spatio-temporal immune signalling
Maja Zagorščak, Andrej Blejec, Kristina Gruden
Doktorska disertacija
Oznake: pan-transcriptome;differential networks;multi-omics;time-series;spatial response;multi-way interactions;plant immune signalling;
As sessile organisms, crops interact directly and indirectly with multiple herbivores and pathogens at daily basis, including pests that significantly reduce yields, however, dynamics of crop-pest interactions is relatively poorly understood. One of the world's most important vegetable crops is pota ...
Leto: 2021 Vir: Biotehniška fakulteta (UL BF)
pISA-tree
Marko Petek, Maja Zagorščak, Andrej Blejec
Video in druga učna gradiva
Oznake: podatki;ravnanje s podatki;ravnanje z raziskovalnimi podatki;raziskovalni podatki;odprta znanost;
pISA-tree
Leto: 2024 Vir: Nacionalni inštitut za biologijo (NIB)
R interface for SEEK API
Andrej Blejec, Maja Zagorščak, Marko Petek
Programska oprema
Oznake: API;fairdomhub;seek;fair;R;pISA-tree;
R interface for SEEK API (connection to FAIRDOMHub)
Leto: 2022 Vir: Nacionalni inštitut za biologijo (NIB)
Št. zadetkov: 38
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