Št. zadetkov: 19
Prispevek na konferenci brez natisa
Oznake:
odziv krompirja na stres;statistične metode;metode strojnega učenja;Super krompir;projekt ADAPT;Nacionalni inštitut za biologijo;
Leto:
2025
Vir:
Nacionalni inštitut za biologijo (NIB)
Doktorska disertacija
Oznake:
pan-transcriptome;differential networks;multi-omics;time-series;spatial response;multi-way interactions;plant immune signalling;
As sessile organisms, crops interact directly and indirectly with multiple herbivores and pathogens at daily basis, including pests that significantly reduce yields, however, dynamics of crop-pest interactions is relatively poorly understood. One of the world's most important vegetable crops is pota ...
Leto:
2021
Vir:
Biotehniška fakulteta (UL BF)
Video in druga učna gradiva
Oznake:
podatki;ravnanje s podatki;ravnanje z raziskovalnimi podatki;raziskovalni podatki;odprta znanost;
Leto:
2024
Vir:
Nacionalni inštitut za biologijo (NIB)
Video in druga učna gradiva
Oznake:
podatki;ravnanje s podatki;ravnanje z raziskovalnimi podatki;raziskovalni podatki;odprta znanost;programska orodja;Python;R;
Leto:
2024
Vir:
Nacionalni inštitut za biologijo (NIB)
Izvirni znanstveni članek
Oznake:
biological networks;clustering;gene expression;time series;dynamic network analysis;dynamic data visualisation;web application;multi-conditional datasets;background knowledge;
Background
Progress in high-throughput molecular methods accompanied by more complex experimental designs demands novel data visualisation solutions. To specifically answer the question which parts of the specifical biological system are responding in particular perturbation, integrative approach i ...
Leto:
2018
Vir:
Nacionalni inštitut za biologijo (NIB)
Izvirni znanstveni članek
Oznake:
Rotavirus;Norovirus;faecal coliforms;RT-qPCR;methacrylate monolithic columns;enteric virus concentration;
This is the first surveillance study using methacrylate monolithic supports to concentrate environmental coastal water samples, prior to molecular target detection by RT-qPCR. Rotaviruses (RoV) and Noroviruses (NoV) were monitored in a polluted area at the Bay of Koper (Gulf of Trieste, Northern Adr ...
Leto:
2018
Vir:
Nacionalni inštitut za biologijo (NIB)
Izvirni znanstveni članek
Oznake:
pISA-tree;ISA model;data management;research data;metadata;
We developed pISA-tree, a straightforward and flexible data management solution for organisation of life science project-associated research data and metadata. pISA-tree was initiated by end-user requirements thus its strong points are practicality and low maintenance cost. It enables on-the-fly cre ...
Leto:
2022
Vir:
Nacionalni inštitut za biologijo (NIB)
Izvirni znanstveni članek
Oznake:
obramba rastlin;rastlinski elicitorni peptidi (Pep);zaporedje RNA;genomi;
Background
Rosaceae species are economically highly relevant crops. Their cultivation systems are constrained by phytopathogens causing severe losses. Plants respond to invading pathogens through signaling mechanisms, a component of which are of them being plant elicitor peptides (Peps). Exogenous ...
Leto:
2021
Vir:
Nacionalni inštitut za biologijo (NIB)
Izvirni znanstveni članek
Oznake:
bioinformatska analiza;anotacije genskih modelov;pregledovalnik genoma krompirja;model krompirjevega genoma;bioinformatics analysis;plant genome annotation;gene model annotations;Phureja group;GFF files;poTato genome model;UniTato;
Potato (Solanum tuberosum) is the most popular tuber crop and a model organism. A variety of gene models for potato exist, and despite frequent updates, they are not unified. This hinders the comparison of gene models across versions, limits the ability to reuse experimental data without significant ...
Leto:
2024
Vir:
Nacionalni inštitut za biologijo (NIB)
Izvirni znanstveni članek
Oznake:
potato virus Y;salicylic acid;hypersensitive response;programmed cell death;callose deposits;necrotic lesion;
Hypersensitive response (HR)-conferred resistance to viral infection restricts the virus spread and is accompanied by the induction of cell death, manifested as the formation of necrotic lesions. While it is known that salicylic acid is the key component in the orchestration of the events restrictin ...
Leto:
2018
Vir:
Nacionalni inštitut za biologijo (NIB)