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The last years have witnessed remarkable progress in the identification of oncogenes and the signaling networks in which they operate. Pathway maps summarizing literature knowledge are widespread and useful, but they do not allow prediction of pathway operation and do not usually include cell-type ...

Spatial omics data provide rich molecular and structural information on tissues. Their analysis provides insights into local heterogeneity of tissues and holds promise to improve patient stratification by associating clinical observations with refined tissue representations. We introduce Kasumi, a m ...